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Questions related to Bioinformatics
I'm looking for latest research articles on transcriptomics and proteomics study on transgenic sugarcane under drought stress
04 April 2019 6,656 5 View
Hello everyone, I am doing a phylogeographic/population genetic study on an island species with limited dispersal capabilities. I'm having difficulty determining between what is biologically...
04 April 2019 9,352 3 View
Is anybody aware of the following NGS data analysis workshop in Germany ? I would like to know if anyone has a feedback if it is good or not ? Would there be any other better workshops to...
04 April 2019 3,196 4 View
What are some interesting research areas in bioinformatics where we can utilise the power of machine learning? And areas which are much easier to cope up with for computer science grads.
04 April 2019 773 6 View
Do anyone can share me somebody online resources for self-learnings of R statistic show package. I have no bioinformatic background but have to work with a dissertation that needs R statistics.
04 April 2019 3,692 3 View
we are planning to buy the gene studio S5 for starting the BIPT testing. we asked and inquired many times for knowing the cost per test for Nipt on above said instrument. i wish to know that what...
04 April 2019 739 0 View
I have modeled a protein, performed MD simulation and Docking studies. What are the other/additional computational study that can be performed further in order to target a high impact journal.
04 April 2019 1,977 7 View
In the data sheet from PD or Maxquant, there are many phosphopeptides which are derived from missed cleavage. That means one phosphosite is distributed to different peptides due to the missed...
04 April 2019 1,754 1 View
Using Genevestigator, we identified a set of genes co-expressing with my gene of interest (transcription factor). Now, I am using PlantPan database to check whether the co-expressed genes'...
15 March 2019 4,708 4 View
I have already downloaded a real data for cancer but each file is 12.8GB so i can not upload the data on galaxy tool, i am also a begineer in bioinformatics i can not work with shell. any one can...
03 March 2019 570 3 View
Hi, could someone let me know about a webportal/ software where I can hunt the sequences for the Type II polyketides and import all the available sequences ? I want to screen all of those...
03 March 2019 1,786 1 View
Hallo, for NGS validation I need public refence genomic data (annotated!), especially the variants annoted against GRCh 37. I am interested in the data from the HUREF and CEPH/UTAH pedigree 1463....
03 March 2019 4,596 2 View
Hello everyone, I was wondering what kinds of information can be deduced from a gene's sequence? I am studying Biology and was assigned a Bioinformatics task for my Molecular Biology project...
03 March 2019 4,025 3 View
Hi all, I have a protein with conserved Threonine and one Lysine in the middle of the protein sequence. Being a charged and conserved amino acid across family domain of this protein, I have strong...
03 March 2019 4,978 5 View
As we know from the Bruker's instruction or CLSI, the recommended bacterial load for identification by MALDI-TOF MS is around 10^5 CFU. Moreover, it is also clear that species identification would...
03 March 2019 7,867 2 View
Can anyone here help me to do LEfSe analysis on my 16S rRna data?I am ready for a collaboration
03 March 2019 8,821 5 View
Suppose 2 genes produce 2 proteins which would be binding. After the genes are turned on and the proteins are produced, then genes can be turned off and the proteins produced can bind with each...
04 February 2019 396 7 View
I need to know the number of gene copies that encode an S-layer protein in certain bacteria whose genome is already annotated in NCBI Also, how can I know whether some of them are truncated or...
02 February 2019 6,661 5 View
Scope of the course should include Human Exome&Genome analyses with basic computational biology&big biological data anlyses. It also should focus on human and clinical outcomes....
02 February 2019 3,515 5 View
Hi, Could anybody please help with the basic understanding how to process AP-MS (affinity purification mass-spectrometry, e.g. mass-spec done on the pull down with an antibody of interest) data. I...
02 February 2019 4,328 4 View
Kindly help me to design a bioinformatics methodology for the list of frame shift mutation associated with a specific disease. These variant are found in a protein which has disorder regions. Can...
02 February 2019 3,139 3 View
Hello colleagues, I feel like it's a stupid question but I couldn't google the answer quickly. Are there any conventional rules about multiple sequence alignment visual presentation - sequences'...
02 February 2019 4,408 1 View
Hello, I used to molview.org for drawing the structure of molecule and saved it as ".mol" format. Than I convert to pdb with PyMoL. But I'm not sure if this is valid? Is there an alternative...
02 February 2019 8,562 1 View
02 February 2019 8,977 6 View