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Questions related to Bioinformatics
It says that it will work only on linux, but I need to use this software in windows for project purpose.
01 January 2019 9,264 3 View
Hi, I have a Transcription factor binding site identificated. And I got a track from Drosophila genome with all the locations of this binding site. I would like to compare the acumulation of my...
01 January 2019 9,773 4 View
Hello! I have bacterial (16s V3-V4) and fungal (ITS2) miseq data from soils collected on different farms where I'm hoping to compare microbial networks in different farming types (conventional and...
01 January 2019 7,496 5 View
Hello, I have not found much information on this, but I was curious if anyone has ever tried to supplement cholesterol and fatty acids instead of just using FBS and used this to simulate a...
19 December 2018 6,273 3 View
I have a list of about 800 Uniprot IDs. What would be a good way to know the common pathways in which these proteins participate?
12 December 2018 2,619 3 View
Is there any rapid publication journals that are indexed by SCOPUS that cover the field of Bioinformatics?
12 December 2018 3,964 2 View
Is there any software like SilVA (a tool for harmfulness prediction of synonymous (silent) mutations within the human genome) for bovine/cattle genome?
12 December 2018 6,690 1 View
Molecular and environmental Biology
12 December 2018 9,948 1 View
from this SVD analysis ı want to find these answers: 1) two vectors that are linked to the eigenvalue of 8.75 2)the meaning the of (0.52 0.85) 3)meaning of vector (0.37 0.74 -0.54)' Thank you
12 December 2018 4,680 0 View
We prepared un-stranded RNA-Seq library (SMART-Seq2) and sequenced in Illumina platform. We mapped with STAR (by adding XS tag) and assembled using cufflinks RABT assembly. Now after comparing...
12 December 2018 2,445 1 View
which laptop configuration should i choose for bioinformatics? I'm going to study the bioinformatics. But, the professor told me that my laptop isn't suitable for bioinformatics. Therefore, i...
12 December 2018 7,071 0 View
bioinformatics- the protein already have crystal structure protein. should we follow the same method as homology modelling? or we can use directly protein from pdb without doing homology modelling...
12 December 2018 4,696 11 View
I need explanation on some specific concepts, in order to get a general understanding mainly in structural bioinformatics. And a suggestions on guides to use integrative software.
12 December 2018 9,925 10 View
I don't know anything about bioinformatics but I'm going to do RNAseq and ChIPseq analysis in R later this year and I would like to know if a Macbook Pro (2018) with a i5 processor, 256 gb SSD...
30 November 2018 9,064 7 View
11 November 2018 2,884 9 View
Tajima's D is a population genetic test statistic reflecting the difference between the mean number of pairwise differences and the number of segregating sites...
11 November 2018 5,327 4 View
"Use at least three different ExPSAy tools to characterise the identified protein – justify choice and present the findings", I have data from mass spectrometer, the mass values and it is my first...
11 November 2018 172 4 View
Hi What are the appropriate bioinformatics software to evaluate linker attachment to antibodies in conjugated anti-soft drugs?
11 November 2018 4,880 1 View
I want to study collinearity of a set of genes. However, while going through a few related papers, I found out that the most used software is MCscanX. I did download it, but since I am not a...
11 November 2018 4,148 3 View
I have read both the documentation and research articles for HHsuite and HMMER, but in terms of practical usage or tangibility when do individuals in this field prefer to use one of these search...
31 October 2018 7,615 3 View
I want to be able, in some quantitative way, to compare several plant species with respect to how much is known about the functions of all known loci in their genomes. It seems like looking at...
17 October 2018 7,235 4 View
10 October 2018 2,628 4 View
I am helping colleagues with setting very basic level of bioinformatic workflow, and since I am also not very familiar with the topic, have to ask the community. They have quite neat new laptop...
10 October 2018 1,352 4 View
Do you know how to change angles in Pymol builder between atoms and where can I find 3d structures of lipids like dgdg (Digalactosyldiacylglycerol) or others lipids?
10 October 2018 2,383 1 View