For self-learning of algorithmic and programming skills relevant to bioinformatics, in a massively fun way, you can check out this site:

http://rosalind.info

Sincere thanks for this link which I recommend to all year 6 students of Canterbury Christ Church University as well as to Dr Chris Harvey and

Dr Simon Harvey, great researchers and lecturers of Canterbury Christ Church University, United Kingdom. Also to all science students.

You are the new wave great scientist and like me, sharing knowledge and help!

Congratulations.

Toute ma gratitude.

Herzlichen Dank

Xiexie.

Brigitte Verhauwaert,

Year 5 Integrated Science

Canterbury Christ Church University, United Kingdom

The online Bioinformatic tools which I have using:

Protein analysis tools: http://www.molbiol-tools.ca/Protein_tertiary_structure.htm

http://www.sbg.bio.ic.ac.uk/tools.html

Protein structure calculators: http://www.molbiol-tools.ca/Protein_tertiary_structure.htm

Tools for RNA analysis: http://rna.tbi.univie.ac.at/cgi-bin/RNAfold.cgi

Tools for Restriction Enzymes: http://tools.neb.com/NEBcutter2/

DNA content analysis: http://www.endmemo.com/bio/gc.php

PCR Primer/Probe design: http://eu.idtdna.com/PrimerQuest/Home/Index

Corrections:

Facebook obligation and credit card obligation - I would add: please students take it carefully. This should not appear in research. This is not a business link.

However a good link : http://openwetware.org/wiki/User:Jarle_Pahr/Bioinformatics#Gene_prediction

Has to be verified.

Thanks anyway. Very good as all links have to be verified. Brigitte

Looks like your site is of a similar scope and purpose as some existing resources, e.g. the Bioinformatics Links Directory (http://bioinformatics.ca/links_directory/), BioResource Index (http://www.stemdb.org/bioresources) or OBRC (http://www.hsls.pitt.edu/obrc/).

Important features that these sites have and yours is missing are, IMHO, advanced search, ratings and links to associated publications (if any).

Thanks due to one and all for your pertinent suggestions. The site will be modified accordingly.

Regards

Hi. I'd like to point out that the link from OpenWetware is on my personal user page, and is in no way endorsed by OpenWetware the organization. In fact, the majority of the content on OpenWetware is user-generated. As such, displaying the link as orginating from "OpenWetware" is rather misleading. Great page, though!

@ JarlePahr, please recommend a suitable title for that.

Your page is much more informative, crispy and useful resource for us.

Its indeed great to refer to the page.

Thanks.

I would like to thank all the scientists having given all these important information. It is such a great help for students.

This isn't a site per say but one of the most useful free programs out there even if it is old. http://www.mbio.ncsu.edu/bioedit/bioedit.html

Thanks ever so much for this precious link Andrew.

You can use this http://www.vls3d.com/links.html#section8 or according to particular work individual softwares are best.

There is an useful confirmed website for both learning and working in biotech field with variable features and lots of essential informations:

http://www.ncbi.nlm.nih.gov/

Hello Parth Sen.

Your link is the link of Daniel Fernandez of the Autonomous University of Barcelona who was so kind to answer immediately and sent his link for the students. All the links received have been noted immediately by students as it will be needed for next academic year. But thanks anyway. So kind from scientists.

Please see this link:

Has any one compiled a list of software processes both open source and priced, used in the CADD? or know A any resource to get it. Apr 11, 2012 ...

https://www.researchgate.net/post/Has_any_one_compiled_a_list_of_software_processes_used_in_the_CADD

Dear Brigitte Verhauwaert ,

I just refeered the link of Daniel Fernandez sir, as i also find it useful..Anyways thanks for your concern and reply.

Dear Andrew, I like to use ExPASy site http://www.expasy.org/tools/

Good luck! I wish you success.

Dear,

there are many tools of bioinformatics but depend upon your interest what you want to do? if you wana to do protein modelling then I-TASSER is best, for characterization EXPASSY good but if wana to learn about courses then use this link

http://www.bioinformatics.org/

For self-learning of algorithmic and programming skills relevant to bioinformatics, in a massively fun way, you can check out this site:

http://rosalind.info

This link/site can also be useful

http://www.ddbj.nig.ac.jp/

Excellent Blogs on NGS, de novo Assembly...

http://www.homolog.us/blogs/

http://www.rna-seqblog.com/

If your interest is to learn data analysis of high throughput technologies such as microarray, Next Generation Sequencing etc. You can follow these tutorials of R/Bioconductor from UCR. They also provided some R programming, linux and linux cluster basics. Enjoy reading.

http://manuals.bioinformatics.ucr.edu/home/R_BioCondManual

The San Diego Supercomputer Center has the Biology Workbench that is very good for molecular biology and structural biology. http://workbench.sdsc.edu/

The following link is to my website at CMU. It presents analysis and empirical data to support the 'Fractal Catalytic Model' of living systems.

The theory addresses the problem of the successful integration of energy/structure and, by implication, information in living systems in order to explain the robustness of living systems and to determine if the extraordinary robustness of living systems may actually be an important clue to our understanding of how information and structure 'work together' in the brain and in biological systems generally.

http://www.psy.cmu.edu/~davia/mbc/

A supplementary page of the website that was the product of a talk (The Candle and The Flame) given in the department of Informatics at Sussex University was included in my own website - which never seems to be available, these days!!!

But here is a copy of it as a word file.

And here is the original ppt presentation

I know some MS related links:

http://www.ms-utils.org/wiki/pmwiki.php/Main/SoftwareList

http://www.ionsource.com/links/programs.htm

http://www.bioinformatics.org/

Thanks everyone for sharing your knowledge.

The following link might be an ultimate link for drug designing

http://www.drugdesign.org/DrugDesignWebEntries/index.html.

Because it contains essential links for online tools and softwares related to drug designing.

If you are working on immune function etc innate DB is excellent.

http://www.innatedb.com/

The website has been updated with all the suggested sites..

More suggestions are cordially welcome,

Thanks for your support & advice.

http://www.imtech.res.in/bic/ following link contain lot of server link and tools which are absolutely free. and most important thing their group have recently introduced linux based OS for Bioinformatics with NO COST. This OS Package contain all required software which are essential in bioinformatics.. if you got any problem, you can contact them or write them. they will surely help you a lot..

@Anubhav thanks for your information. IMTECH's Dr Raghava's website on BI Tool is already there in the page.

You can please follow the links below:-

1. http://facility.bioinformatics.ucr.edu/home/links

2. http://bioinformatics.ca/links_directory/

3. http://www.ii.uib.no/~inge/list.html

4. http://pbil.univ-lyon1.fr/bookmarks.html