I am using serum depleted media for isolating exosomes from MSC, the depletion time period was for 36h. But the protein concentration estimated by BCA assay was too low.
I followed exactly the same protocol, but unfortunately the pellet was not visible might be due to low exosome content and the same was revealed by the protein estimation.
whats the starting volume of your conditioned media for isolation..? usually i do with volume not less than 100 ml and a transparent pellet is visible after the first UC step itself