I looked up many protocols for freezing bacteria, but the concentration of glycerol varies from 20% to 80%. How should I choose? Is it v/v or w/w? One of the protocols mentioned spinning the cell first and then adding fresh medium and 20% glycerol.
If liquid nitrogen is unavailable, is it ok to put the mixture from RT into a fridge at -80C? Sometimes cell pellets formed after freezing, how can I avoid pellet formation without using liquid nitrogen?
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updated on April 9
I think I may fine some causes to the previous failure of my recombinant expression E.coli. Some colleagues suggest that there are different treatment for different types bacteria.
Sergii Pochekailov: as for a high-expression-rate strain, it is better to use freshly transformed bacteria, or the expression would drop dramatically.
Jen-Ning Tsai: in the case of the BL21 and its derivatives (commonly used in recombinant protein expression), the manufacturers suggest a lower glycerol concentration for storage of the cells, since glycerol concentrations (> 10%) may lead to plasmid instability.
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updated on June 7
Ignasi Roca mentioned another interesting method for bacteria storage. Using skimmed milk instead of glycerol. Since scraping the vials without completely thawing the sample required a very fast operation, he change into 20% skimmed milk. He get longer survival times, besides, thawing is not an issue anymore! I f you are interested, the protocol is detailed in his answer and attatched paper.