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Questions related to Bioinformatic Tools
I have downloaded AutoDockTools and AutoDock as well as Vina. I am trying to run the program and the cmd shows me the following message. What can I do to fix it? Thank you in advance!
28 January 2019 9,688 2 View
I need to make a structure for an unknown viral protein. I prefer online tools
23 January 2019 5,431 2 View
I am trying to find a bioinformatic tool to analyze FASTAq coming from ITS region
11 January 2019 818 5 View
A newby question: I have a mammalian protein for which I would like to know "its history". Is there any tool/platform I could use to check the presence of this protein's orthologs in different...
01 January 2019 629 16 View
01 January 2019 9,883 2 View
01 January 2019 606 4 View
Can someone suggest any reliable bioinformatic tool to search bacterial promotors from the bacterial genome sequence ?
01 January 2019 3,704 2 View
Assume that reference mitochondrial genome is available, but whole genome of organism is not.
01 January 2019 1,858 3 View
01 January 2019 1,332 6 View
Currently I'm working on a bioinformatics project in which I'm trying to predict the function of an uncharacterized honey bee protein by comparing it to other known proteins. The query protein I...
12 December 2018 5,640 5 View
Bioinformatics and Genetics Research
12 December 2018 792 1 View
When a large number of living cells are targeted simultaneously using CRISPR, the use of bioinformatic tools can speed up the process of identifying the sequence variations of CRISPR products from...
12 December 2018 10,084 3 View
MLST tool used for screening of housekeeping genes in a particular genome. Is this possible to search for those genes which i want to find out there presence ? I have about 30 genomes of a...
12 December 2018 8,994 4 View
greetings researchers, I am working on phenotype microarray for mammalian cells using carbon sources utilization plates, now I am looking for a suitable bioinformatics tool to find the role of the...
24 November 2018 3,756 1 View
I am searching a insilico tool for predicting the possible interaction between viral protein those interact with human proteins.
11 November 2018 1,048 0 View
Hi everyone, I'm trying to use the MicrobiomeAnalyst tool but after Data Upload i can't proceed. Follows the text summary: Data type:OTU abundance table File format:text OTU...
11 November 2018 7,828 1 View
11 November 2018 284 1 View
I need to filter a vcf file for genotype quality and depth. How do I choose my filter parameter value? vcftools --gzvcf snps.txt.gz --quality ?? --depth ?? --recode --recode-INFO-all --out...
11 November 2018 3,229 0 View
How to clean up sequence after vecscreen. What bioinformatic tools to use for this process in order to get a clean sequence, please? Thanks in advance
11 November 2018 6,249 4 View
Hi, Can anyone please tell some bioinformatics server that helps in predicting the location of flexible region in a protein.?
11 November 2018 6,600 0 View
10 November 2018 7,577 1 View
I have a set of 331 point counts of nine different species across six sites. At some of the sampling points the total observations equals zero, so calculating the Shannon-Weiner diversity index is...
05 November 2018 8,366 3 View
Hello, everyone. I'd like to know if anybody has an executable file of Kalign tool for Windows, since it is, nativally, for Unix. Thanks!
24 October 2018 3,740 4 View
I am not a specialist in genome annotation procedures. I found a good review "A beginner's guide to eukariotic genome annotation" written by M.Yandell and D. Ence in 2012. They mention that...
11 October 2018 375 4 View