hello
I want to calculate the bridged water(i.e water which is H-bonded to both protein and DNA) in protein_DNA complex by using GROMACS.
Check the links below. They may be helpful
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2279814/
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1305475/
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