By giving a sequence as an input, are there any available computational tools for finding the pseudogenes in a particular organism?
Hi,
I suggest you to see links and attached files on topic.
The GENCODE pseudogene resource - NCBI - NIH
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3491395/
Using BLAT to Find Sequence Similarity in Closely Related Genomes
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4101998/
A computational approach for identifying pseudogenes in the ...
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1810550/
IJMS | Free Full-Text | Pseudogenes and Their Genome-Wide ... - MDPI
https://www.mdpi.com/1422-0067/17/12/1991/htm
Bioinformatics tools for genomic and evolutionary analysis of ...
www.bmbtrj.org/article.asp?issn=2588-9834;year...2;...
Translation - Online Analysis Tools
https://molbiol-tools.ca/Translation.htm
Identification and Analysis of Genes and Pseudogenes within ... - PLOS
https://journals.plos.org/ploscompbiol/article?id=10.1371/...pcbi...
Best regards
Thank you! @Mohomad
AnnoTALE is recommended
Thank you sir! @Ajit
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