It will depend on what you are working but if I am correct, in the litterature there are several population of secreted miRNAs. contained in exosomes (50-200 nm vesicles), microvesicles (>500nm vesicles) and free miRNAs. If you isolate the particles containing the miRNAs you will discriminate your miRNAs populations and improve the isolation. Hope this helps.
Hope not to be too late... I am using the protocol described by Exiqon (see the link for a PDF file). These people from Exiqon are commercializing now a new kit for the extraction of miRNAs and other RNAs from biological fluids. I never used, but the feedback that I got from some customers is EXCELENT... Let me know if I can help.
I've always used miRVANA kit. Works pretty good and the advantage is that you can measure mRNAs in the very same RNA. Plus, miRVANA PARIS allows you also to extract protein from the same cells, so you can have miRNA, mRNA and protein from the same cells.
Hi, I would just like to mention that several other products are available for both generic enrichment of exosomes as well as a bead based isolation of exosomes by targeting exosome surface markers such as CD63. Such bead bound exosomes can be used e.g. for downstream flow analysis, WB and TEM