I want to know if a sequence is related to a pseudo microRNA precursor or not. I tried to use the Mipred database but it seems to be out of reach. I'm eager to know if there are any other databases I can use.
Please have a look to below links, that might be helpful for you. http://wwwmgs.bionet.nsc.ru/mgs/programs/rnaanalys/mirna_premirna_prediction_tools.html
Well, the most widely used database at present is RumimiR, it contains all published miRNA sequences data, enables data filtering. The selection of microRNAs is based on defined criteria such as animal status or tissue origin.
You'll find in this link a relevant alternative database for Mipred. http://rumimir.sigenae.org/