Is there a web-based software available to name newly discovered and non conserved miRNA based on the deviation from the original miRNA sequence?

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Francisco J. Enguita

Hi Mahmoud

I am not completely sure, but you should follow the Mirbase requirements for the nomenclature of newly discovered miRNAs. As far as I know, there is nothing like you suggest in the market.

Try to contact the Mirbase team, and ask them directly.

Good luck. Best

Paco

Mahmoud Yaish

Thanks Paco for the answer. It looks that I need to do it manually.

Regards,

Mack

Adnan Hashim

check miRanalyzer , mirDeep2, or iMir. May be useful.