Using Enricher I can see that my gene set contains 235/3478 genes known to be targets of CEBPB via the Transfac/Jasper tab. Does anyone know where i could get the list of all the CEBPB genes so that i can specifically query additional data sets that I have for this gene network.
Thanks in advance for your help!
B.
You should be able to download datasets from published ChIP-seq experiments and search them for binding sites.
Dear Dr. Bobbi,
Please check the link: http://string-db.org/
I think, It may help to identify protein network.
Thanks
Sagar
I dont think my question was clear. Within Transfac is a list of genes downstream of CEBPB and the Transfac checks the list of genes that I upload to it againsts the CEBPB gene list it has and tells me which ones match. I want to find the full list that Transfac uses. Is it available anywhere ??
- Badges
- Science topic
- Similar topics
- Biological Science
- Molecular Biology
- Molecular Biological Techniques