Good morning,
I am very new to ATAC-seq and library preparation.
I just did my first trial in Arabidopsis samples and after tagmentation and library prep the bioanalyzer profile doesn't look very promising (see attached).
What I really don't understand is the very concentrated peak around 1000-1500bp (100s) in all samples. Even in the last one (which is genomic, it can be seen).
Any idea of the origin of this band/peak? (I have my theories but I want unbiased answers! xd)
Thanks!