Dear All,
Could any of you suggest how to get to the function of small nucleolar RNAs ? I got tons of them after a small RNA sequencing experiment and would like to know their functions or biological relations. Is there are some dataBase ?
Thanks
Hi Samir,
Simply run a local BLAST on your dekstop using the available datasets at the following databases.
http://snoopy.med.miyazaki-u.ac.jp/
http://lowelab.ucsc.edu/snoRNAdb/
https://www-snorna.biotoul.fr/
Identify the best hits based on their E value and identity score and assign the function of its homologue to your query.
Hope this helps
Best
Sayak
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