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Questions related to Bioinformatics and Computational Biology
I think I know the answer to the question but cannot find anything relevant in literature searches. Ive used 18s V7 for eDNA metabarcoding exercise. My interest is Macroalgae which first have a...
30 July 2025 631 0 View
Dear scientists/experts. I have two sequenced isolates (16s rDNA) recently searched using BLAST-N, the results showed that the first has a high query coverage (95-100) and low similarity...
25 July 2025 2,027 0 View
DOI: https://dx.doi.org/10.18203/2349-3933.ijam20205051 Systematic Review ArticleClinical efficacy of ayurveda treatment modalities in the management of garbhashosh (intrauterine growth...
19 July 2025 2,831 1 View
I’ve encountered an issue regarding my paper’s DOI. It appears that someone else has incorrectly associated my DOI with their publication on ResearchGate. As a result, when I attempt to link this...
10 June 2025 5,407 2 View
If a Structural Equation Model (SEM) fails to fit the data adequately, does that mean the data cannot be interpreted or predicted using any other analytical method? What alternative techniques...
09 June 2025 7,170 3 View
Hello everyone... I am currently working on SNP identification between wild boar and domestic pigs with nuclear genome level. I am using progressive Mauve for whole genome alignment and Geneious...
12 May 2025 4,816 1 View
Trying to double check a few weights that are off the range I´ve found for some animals.
14 April 2025 2,825 2 View
Is there a standard for how long it takes when we want to sample benthic macroinvertebrates in several microhabitats? Ex: 1 minutes or 2 minutes per microhabitat? and how do we determine the...
10 April 2025 6,415 7 View
I'm a graduate student in paleoclimatology, but I only have a foundation in marine science. What textbooks should I read to gain a systematic knowledge of paleoclimatology?
26 February 2025 6,965 3 View
For some constructs, my AVE values are below 0.5 (e.g., 0.44, 0.35), but CR is above 0.7(ranging from 0.838 to 0.954). HTMT values for some constructs are above 0.85. I noticed VIF > 3 for a...
25 February 2025 7,579 2 View
Hope this is not a stupid question but I cannot get a definitive answer from the DNA guys here at Aberdeen or from published papers. I have used 18RNS to do a marine eDNA survey. Usually eDNA is a...
12 February 2025 9,554 0 View
What are the equipments required to establish a medium Herbarium for a teaching Department of Botany?I want to digitise herbarium specimens.?
09 February 2025 1,016 7 View
I am doing population analysis of an insect species using COX1 sequence where two populations are showing FST of 1 but they are being grouped in the same haplogroup in a median-joining network. I...
28 November 2024 2,401 0 View
Хотел составить карту ледников Ферганской долины. Поэтому я обращаюсь к этому вопросу с целью изобразить ледники другим способом, а не схематической картой? Заранее спасибо тем, кто нашел время и...
23 November 2024 5,491 1 View
Se encontró en la región de Puno, Perú - zona de Pucara, perteneciente a la formación Ambo, de alguna manera llegamos a las ideas de que podría ser una MALANZANIA o HAPLOSTIGMA
29 October 2024 2,853 1 View
Hello, I am doing 16S rRNA (V5-V7 region) metagenomics analysis with Galaxy Server. I downloaded SILVA_138.2_SSURef_NR99_tax_silva.fasta.gz from...
04 October 2024 6,229 0 View
How can we optimize microbial consortia for bioremediation in environments with fluctuating physicochemical conditions, such as extreme pH shifts, temperature variations, and competing...
15 September 2024 3,624 0 View
There is growing interest in techniques like single-cell genomics and metagenomics to study microbes that are difficult to culture using traditional methods.
04 September 2024 5,333 2 View
How much frequency and magnetic field do we need in tunneling magnetoresistance for detecting cancer biomarkers?
19 June 2024 5,519 0 View
I performed a dynamic simulation of an aptamer-protein complex using the Namd software, and I want to the calculate the RMSD value using vmd
16 February 2024 6,038 1 View
I'm doing several steps, such as minimization and equilibration, to start running MD simulations and I'm trying to automate this process by running one step after finishing the other. When I go...
11 February 2024 7,765 1 View
I'm trying to perform MD simulation of protein-ligand complex. The step5_production.inp was set for 100ns. After running for around 30ns the program stop automatically. How will i modify the file...
07 January 2024 1,573 1 View
Hello, I have performed a simulation of Sodium Montmorillonite swelling due to water adsorption. However, I am not sure if the simulation is correct. I followed the following steps: 1. A model of...
18 December 2023 10,052 1 View
Hello, I hope you are well, I have been searching and I cannot find the components to make an RNase decontamination reagent in the laboratory, without having to buy the RNase away. Thanks
27 September 2023 5,393 1 View