exact normalization, correct preparation of standard samples and standard plot, prevention of any contamination in real-timePCR components and finally it is must properly design primers.
Hi, I recommend you to read literature, f.g. http://www.amazon.de/Real-Time-PCR-BIOS-Advanced-Methods/dp/041537734X/ref=sr_1_5?ie=UTF8&qid=1395217387&sr=8-5&keywords=real+time+pcr
Or coming soon: http://www.amazon.de/Quantitative-Real-Time-PCR-Protocols-Molecular/dp/1493907328/ref=sr_1_4?ie=UTF8&qid=1395217446&sr=8-4&keywords=real+time+pcr