I am trying to isolate a nuclear protein, NF-kB, from raw cells in order to do a western blot. Can anyone suggest a protocol for isolating this nuclear protein?
There is nothing particularly difficult about studying this protein by western blot. You can just make a normal cell extract and perform SDS-PAGE using a standard protocol. The easiest would be to lyse cells directly in Laemmli buffer and then sonicate briefly to shear the DNA.