We also have similar problems that the toxicity is high, but the deletion is minimal. I still dont have a solution, but the general conclusion from literature/discussions was that the efficiency differs too much depending on the locus. Anyway i could induce better deletion, when cells are in better dividing state and once confluent there was hardly any effect. Are you treating after complete differentiation??
I was wondering if you use the tamoxifen ex-vivo or not. I guess you isolate the BMDM from your mice and then treat them with 4-OHT? Would be possible to treat the animals with 4-OHT and then isolate the BMDM? I haven't tried yet but I am about to put my hands on this and I was wondering if this may works. Best.