I think histone proteins. They are present in abundant in nucleus and I feel strongly that their amount won't change drastically to stimulus generally we give to various cell lines over 24 hours. I could not see any change of histone proteins even after 24 hours of curcumin or MPTQ treatment. I hope it will work with you as well. You have to load very less amount of total protein may be only one micro-gram of nuclear extract proteins.