What do you mean by RAW DNA sequences ? What sequencing did you do ?

Nevertheless, please read about DADA2, QIIME2, Mothur, MG-RAST, Galaxy server, Unipro Ugene, BioEdit and choose according your need/expertise.

Hi

In case you are asking for metagenomic data...if you have prior knowledge of programming , you can go for QIIME2, Mothur. If you are looking for server based analysis you can try Galaxy, MG-RAST , Kaiju. If you can afford you can go CLC genomics workbench as well metagenomic workbench.

Hope this helps

Depending upon your sequencing type, you can follow link:-

https://qiime2.org/

http://huttenhower.sph.harvard.edu/humann2

https://usegalaxy.org/

https://benjjneb.github.io/dada2/tutorial.html