Slow Haddock 2.4! - FAQS.TIPS

01 January 1970 0 9K Report

Has anyone faced slow HADDOCK 2.4 version? My job is running since 48 hrs!

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Science method

More Mishal Shaheen's questions See All

Can methyl cellulose be used as a binder in the preparation of zeolite pellets?

I am currently preparing zeolite pellets for adsorption applications, specifically for removing phosphate and ammonium from aqueous solutions. So, I need to know about the binder used during this.

27 May 2024 5,802 0 View

What is the Optimum Neon Transfection Setting for CRISPR/Cas9 RNP in THP-1 Cell Line?

I am trying to transfect THP-1 cells with RNP of CRISPR/Cas9-GFP using ThermoFischer Scientific Neon Transfection System. The current settings are 1400V, 20ms breadth, and 2 pulses. I have done it...

26 May 2024 970 0 View

How do I prepare zeolite pellets that can use for metal removal and how can i prepare different size if pellets?

I want to remove phosphate and ammonium from wastewater for this I want to prepare zeolite pellets.

15 May 2024 3,342 0 View

How to attach 6-thioguanine with citrate stabilised gold nanoparticles?

We have prepared 14 nm GNPs by using classic citrate synthesis method where trisodium citrate is being used as reducing and stabilising agent. Then we put 6-thioguanine (purine analogue with an S...

06 November 2023 7,903 1 View

The value of my adsorption energy for a gas adsorbed on a metal oxide surface is positive. Is it acceptable? How do I explain it?

I am working on the adsorption properties of formaldehyde on a metal oxide monolayer. The least adsorption energy value for one of the configurations turned out to be 1.55 eV. What shall I do now?

14 August 2023 5,715 1 View

Tetra-Arms PCR: Gel shows CC and CA alleles but no AA alleles in any sample. Technical issue or probability?

40 samples show one heterozygous (CA)(175bp, 202bp) and one homozygous allele (CC)(202bp) only and not (AA)(175bp) allele. Attached is just a snippet of some samples showing CA and CC allele...

04 July 2023 5,698 1 View

Smart-Pls ? , Discriminant validity , What is the recommendation ?

Can we confirm discriminant validity for the measurement model in the following case? AVE for latent constructs with the correlations among measurement constructs strongly supports (Fornell &...

13 June 2023 8,399 0 View

How to store ultra-centrifugal Amicon filters for further usage?

I have used my amicon filter one time for concentrating down the TEV protease. I want to re-use the device again in future for the same protein. How to store? Buffer and storage temperature?

12 June 2023 2,774 3 View

Tetra ARMS PCR shows only one mutation in samples. How to troubleshoot to get the other when I don’t have any Positive control?

My Outer forward, Outer Reverse bp size is 326bp, which shows in my samples. There are two possible mutations: One showing band size of 202 and the other at 175. All of my samples show either no...

08 June 2023 237 7 View

Would it be appropriate to refer to pine needles applied to soil as "crop residues"?

If you are applying both wheat husk and pine needles to soil, can we collectively refer to them as "crop residues"? If not, what would be a more appropriate term?

12 April 2023 1,615 2 View

AUX gas reading problem on QE with full MS and PRM method in one run?

Dear QE-users, In the method where full MS positive mode and PRM mode are used, we always get an incorrect auxiliary gas reading (41 instead of 25). This only happens in this method; other...

06 August 2024 4,953 0 View

People weight in Oaxaca Blinder Decomposition on R?

Hello guys! Do you have experience running a Oaxaca-Blinder decomposition on R applying person weights. How do you suggest doing it? I have a variable PERWT which gives more information on how...

04 August 2024 6,033 0 View

Challenges Faced by Freshers in IT Sector Recruitment?

i need to know what the key factors that the freshers are facing to get into the recruitment process, explain me clearly

31 July 2024 6,872 2 View

How to perform EEG source analysis on each trial of data separately?

Hello Everyone I have a question about structure for connectivity analysis on sources. My goal: preprocess and cut data into trials create headmodels, using template MRI file perform source...

30 July 2024 2,744 1 View

How to add Cr parameter in autodock?

When I run autogrid4 it says: autogrid4: ERROR: Unknown receptor type: "Cr" -- Add parameters for it to the parameter library first! Look forward to your reply.Thank you so much!

29 July 2024 488 0 View

Why running a restart analysis in Abaqus in Ubuntu OS gives an error as attached when running the same job in Windows doesn't give any error and runs?

I am trying to run a restart analysis, which imports deformed configurations of parts from a generated ODB file. It runs fine in Windows OS but when I try to run it in Linux OS, it is giving some...

29 July 2024 9,572 3 View

How to use Desmond in HPC ?

Our department has recently acquired an HPC (High-Performance Computing) system, and I'm thrilled to take my molecular dynamics calculations to the next level using Desmond. I used to run my...

28 July 2024 6,553 1 View

What are the most effective strategies for integrating sustainability in your expertise?

What challenges do you think businesses or entities face in implementing these strategies? Thanks

28 July 2024 2,125 14 View

How do I run a dead well test for a QuantStudio 5 qPCR machine?

I am preparing to run a lot of samples on a 384 well plate and I wanted to test if any well in my PCR machine is dead so as not to lose any data. I would really appreciate help with how I can do...

24 July 2024 8,172 1 View

I encountered a situation where the 16s PCR amplification worked perfectly with the DNA from the same sample, but using the same sample Don't working?

I isolated microbial DNA from marine water samples taken at various sites using the Qiagen Power Water DNA Isolation Kit, including a modified enzymatic lysis step. I encountered a situation where...

24 July 2024 9,688 0 View