Quantifying IHC between treatment groups?

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How to evaluate unsupervised clustering metrics when some elements do not have a cluster label in the result?

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Sergey Arkhipov

Hello,

ImageJ can be used for this ( https://imagej.nih.gov/ij/download.html )

The advanced more powerful version of ImageJ FIJI is also freely available at https://fiji.sc/

Olatunde Akanbi

You can as well try Artificial Intelligent software like Alforia.

Roman Schoenauer

You can use QuPath ( https://qupath.github.io/ ) or Fiji imageJ ( https://fiji.sc/ ) for quantitative IHC image analysis. Both softwares are freely available.