I want to make a rapid detection of rice pathogens from symptomatic samples.
Wether fungal or bacterial
Go for 18s/16s r rna identifications
Indeed, use universal primers for 16S, sequence and check against the EzTaxon database (http://www.ezbiocloud.net/eztaxon).
Yes, 16S rDNA (for rRNA) is the way forward
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