I have extended the simulation from 10ns to 20ns using .cpt file during molecular dynamics run,when i am trying to analyze the result i am getting the graph only from 10ns to 20ns instead of 0-20ns. How can i get the graph from 0-20ns??
Krishnendu Bera
Dear Monica
First concatenate your both trajectories using gmx trjcat command of gromacs. Then do your analysis. Then you will get 0-20 ns graphs.
Other wise edit the .xvg files by merging two analysis data.
Hope this will help you.
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Angana Ray
You might not have used "-append" option, that means you have two trajectories (0-10ns and 10-20ns). So, before analysis concatenate them.
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