I want to study the effect of non host protein on B cell subset, so can I directly inject this protein in mouse iv and then do immunophenotypying of spleen by flow cytometry in comparision to B cells fom albumin protein injected in mice.
Yes, you can inject iv and analyze the surface phenotype of the splenic B cells. What are you specifically looking for? Up-regulation of activation markers? Or are you anticipating depletion of a particular B cell subset (FO vs MZ)?. Your approach seems sound; however, I would caution you to verify the absence of TLR agonists or other associated PAMPs with your proteins because they may confound your result. Best of luck!
Do you anticipate an increase or decrease in transitional (T1/T2) B cells, or an expansion/contraction of FO vs MZ? What markers are you intending to use to discriminate the splenic B cell compartments?
I will just be looking at change in percentage of Immature, mature, activated, plasma and memory B cell population in spleen by using marker antibodies specific for each subset and not for the compartment.