Hi,
I have some BAC sequences, each assembled as a unique scaffold, and corresponding to a region of interest.
I also have scaffolds from an inaccurate genome reference that have been retrieved after BLAST of the BAC sequences.
I'd like to assemble all these sequences to get a better view of the region.
I do not have any external info such as distance (only sequences).
Is there any software that can be useful for this task ?