Can you advice me how I can calculate polymorphism information content of co-dominent markers from binary data file?

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Gerard Tromp

PIC can be defined as 1 - uninformative matings. So for codominance, it depends on how many alleles there are and which combinations are uninformative. For standard additive multistate alleles PIC is 1 - sum(squared homozygote frequences). For codominant loci it is highly dependent on the specific locus.

Suaib Suaib

You may addressed to use the WinArl135 Statistical Analysis Program package to solve that problem, hopefully success.