I am seeding cells in 12 well plate, but first i put inside the cover glass (cells are grown on cover glass and then after staining I place them on basic glass and put few drops of fluoromount to make a specimen). Good luck!
Depending on your imaging platform, I highly recommend FITC-conjugated anti-phospho(Ser139)-H2AX antibody (γ-H2AX-FTIC, Millipore). I have attached my pub with the methodology, and please feel free to contact me if you need additional details.
Article Alkbh8 Regulates Selenocysteine-Protein Expression to Protec...
In order to get clear foci, the primary antibody should be added in the presence of 0.1-0.05%% Triton X-100 (or tween 20) and considerable washings with the same in buffer should be applied after primary and secondary antibodies - more extensive than in usuall immunocytochemistry.