I want to investigate the structutre of my nanoparticles through RPBS web portal used for structural bioinformatics and drug designing. The lack of tutorials is making it really taking, any leads will be appreciated. Thanks in advance.
Sambit Mandi
Here are a few popular ones:
1. RCSB Protein Data Bank (PDB) (https://www.rcsb.org/): The RCSB PDB is a comprehensive resource for the three-dimensional structures of biological macromolecules. It provides access to a vast collection of experimentally determined protein structures, as well as tools for visualization and analysis.
2. SWISS-MODEL (https://swissmodel.expasy.org/): SWISS-MODEL is a web-based platform for protein structure homology modeling. It allows users to generate 3D models of protein structures based on known templates and perform various analyses and comparisons.
3. PyMOL (https://pymol.org/): PyMOL is a powerful molecular visualization tool that can be used to analyze and visualize protein structures. While it is not a web portal, it is widely used in the field of structural biology and offers extensive documentation and user guides.
4. Schrödinger Suite (https://www.schrodinger.com/): Schrödinger provides a suite of software tools for molecular modeling and drug discovery. They offer a range of web-based applications and resources for structure-based drug design and virtual screening.
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