I have the sequence and structure model of a protozoan enzyme and I want to find compounds commercially available in the ZINC12 database that could inhibit this protein. Thanks in advance for your comments!!!
ZINC, last I checked, cannot do virtual screening: it is simply a database of molecules. If you want to do screening, you'll need software (docking, QSAR, or some other method). Then download the molecules from ZINC, and then run them through your software, docking them, comparing them to a QSAR model, etc.