Hello,
I am performing a western blot of my SARS-CoV-2 Spike-pseudotyped lentiviral particles. I denature my virus by adding concentrated virus to 2X Laemmli buffer at 1:1, then boiling for ten minutes. My antibody recognizes the S1 region. Will my denaturation protocol result in cleavage of S1+S2 into S1 and S2? For this cleavage to occur, the furin cleavage site must be cut. Will heat, DTT, and SDS present in my protocol achieve this? Also, in wild-type virus and lentiviral particles are there any cleaved species of these proteins naturally present following egress from the host cell?
Thank you!