It seems it is microbiological degradation and probably the textile industry (yes, this is a guess!). The genes involved are 16S rDNA. The 5`-GAGTTTGATCCTGGCTCAG-3` (positions 9 to 27 (Escherichia coli 16S rDNA numbering) and 5`-AGAAAGGAGG TGATCCAGCC-3` (positions 1542 to 1525 (E. coli 16S rDNA numbering).
There are a lot of dyes and even more microbiota. So, rest of the other details on providing complete info on the query regarding the dye, nature, mode and mechanistic aspects of the degradation!
There is plenty of literature on this subject. Here are some examples.
Laccases (EC 1.10.3.2), lignin peroxidases (EC 1.11.10.14) and manganese peroxidases (EC 1.11.1.13) are mentioned in the context of dye decolorization in this article: