What is decrease in redundancy in a multiple sequence alignment and how it is performed?

22 September 2017 1 2K Report

I have a huge set of 2500 protein sequences and want to minimize them in some representative or useful sequences, now hw to perform this. Is there any tool available for this or I should perform it manualy based on sequence knowledge.

Ilya V Kublanov

cd-hit is easy-to-use and operates both on-line and off-line.

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