Hello all,

I would like to ask if someone know some user-friendly tool which is able to predict and visualize domains in my protein alignment. I have long protein alignment (over 1000 aa) and I want to create something like this (please see figures bellow) for publication. I know PFAM or SMART tools, but unfortunately they support only single amino acid sequence query, not multiple queries or alignment....

Many thanks for all suggestions

Martin

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