Is there anyone interested in transcriptomic analysis of Sporothrix schenckii?
Unfortunately my research group is not able to use NGS and I would like to sequence the cDNAs of this very important pathogenic fungus. Currently there are no data about transcriptomics of S. schenckii.
Anyone interested please contact me.
Orazio
Dear Orazio,
hi,
please tell me about your project, then we will discuss about the work.
Dear Ram Nageena,
Thank you very much for your reply.
I am interested to apply NGS technology to study the transriptome of a very important pathogenic fungus: Sporothrix schenckii.
Currently there are no available genome sequencing projects for this fungus and no data are available.
S. schenckii is a dimorphic fungus that is mold at 25°C and yeast-like at 37°C therefore I wold like to know the profiles of mRNA at these two temperatures. I can do cDNA but our laboratory is unable to sequence it by NGS.
These data are very important also because the sequence deposited in genbank are lacking and the scientific community needs to develop an MultiLocus Sequence Typing (MLST) Scheme for tiping this pathogenic fungus. Moreover there are several other advantages to study this fungus at genomic/transcriptomic level and to publish it rapidly.
Best regards
Orazio Romeo
Hi Orazio,
My company has both 454 and Ion Torrent capabilities. Please check out our website, we can help!
http://researchandtesting.com/
Dear Orazio, what can I do is to forward your e-mail to my collaborators at IGA (Instituto di Genomica Applicata) in Udine. They have a lot of experiences in NGS and in agricoltural research. I think they will be really helpful for your research. Let me know.
Best wishes
Renata Lonigro
Neurogenetics Laboratory
Department of Medical and Biological Sciences
University of Udine
Hi, we can do analsis . If sequencing is done . Let me know if you have sequencing done we can help in analysis.
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