Sorry, but we do not have experience with this proteinase in virus protens. We have projects with serine proteinase of parasite as Leishmania sp and Trypanosoma cruzi. Basically ours experience with proteinase catalysis is with the use synthetic peptide or native proteins.
Thanks for your effort Carlos, what I want to do is, I want to separate viral cores form the lysate. I am facing the problem of matrix and membrane proteins sticking with the viral cores and coming always with that. So I want to get rid of those unwanted proteins by proteasedigestion. Sure I can use any other proteases than Subtilisin. help me!
Hi, Ananda. Those unwanted proteins are hydrophobic proteins? One possibility is to use TX- 114 extraction method (Bordier 1981; Alves et al 1993; Azevedo-Pereira et al., 2007; Oliveira-Jr et al 2008). You can assess the viral sample by this fractionation procedure. Thus, you will obtain two proteins preparations: hydrophilic and hydrophobic proteins. Probably the hydrophilic fraction is your interest.
Begin with low concentration 20% for example , then centrifuge and keep the precipitate, then precipitate the supernatant at 30% final cc ( you must adjuste the cc which was 20%) , then centrifuge and discard the supernatant .
In the latter the ammonium sulphate will be adjusted at 40%....80%
You have to look for your proteins in each step and in the two fractions : precipitate and supernatant. you must have an efficient test to identify these proteins.