Hello,
Can anyone recommend please a user-friendly software to determine dN/dS ratios on all genes in a large genome alignment file?
Thank you
Hi Tamara, I know this is a bit late, but DNAsp is extremely easy to use. Make sure you have your sequences aligned and good luck!
Thank you dear Vanessa Poletto Borges for the suggestion!
I ended up using TOPALI to infer evolutionary selective pressures using various models.
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