I am trying to run RNA on 1% agarose/formaldehyde gel using 5x MOP buffer and SybrSafe staining instead of ethidium bromide.
what is the proper voltage and time? it says 5-6V/cm, but how can I calculate how much that is?
I ran with 90V and 90minutes! but results were weird. I also tried 75V 60 minutes, didn't get the optimal results either meaning the 18s and 28s do not deparate.
what is the problem