Sorry to reply you so late. But I think Angiogenin is the best marker for aniogenesis. But there are other markers also you can look into the link i am sending to you.
for the protocol plz see this paper entitled A therapeutic target for prostate cancer based on angiogenin-stimulated angiogenesis and cancer cell proliferation. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1599992/?tool=pubmed. It is free access.