Is there any online tool available for predicting promoter and terminator sequences within the mRNA sequence?
Please have a look at this site:
http://molbiol-tools.ca/Promoters.htm
Regards, Christian
thank you for your reply, I tried a few tools on that website but it doesn't work..
When working with the prediction tools you need to enter the genomic DNA sequence. mRNA does not contain promoter or terminator sequences. These regions are needed for the correct transcription of DNA-encoded genes.
Cheers, Christian
You can check for promoter :http://www.fruitfly.org/seq_tools/promoter.html
and for terminator:http://rna.igmors.u-psud.fr/toolbox/arnold/index.php#Results
thanks
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