SNp database show rs6166 is a G>A polymorphism and is represented as ser680Asn. but authors refer it as Asn680Ser which one is correct. which is wild type and which is variant.
Kristian Almstrup
I suggest that you look at ensembl
In general T(A) is more frequent than C(G), but the heterozygote CT is the most frequent genotype.
- C: 0.407 (2040)
- T: 0.593 (2968)
- C|C: 0.162 (406)
- C|T: 0.490 (1228)
- T|T: 0.347 (870)
However, different populations have different distributions, which is why the distribution can be different and probably why there is differences in publications/databases. This is often the case when the minor allele frequency is high. You can pick the population most similar to the one you are studying at ensembl.
http://www.ensembl.org/Homo_sapiens/Variation/Population?db=core;r=2:48962282-48963282;v=rs6166;vdb=variation;vf=5888
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