In silico methods of cancer

More Madhu Sudhana Saddala's questions See All

The homology model protein is how much reliable to X-ray crystallographic model protein?

09 October 2015 2,793 0 View

What is free calcium? How can estimate?

07 August 2014 7,896 0 View

I want to calculate a multiple sequence alignment for Nseq sequences. How many pair-wise alignments will I have to calculate ?

07 August 2014 5,658 0 View

How do I perform pattern mining of 12 nucleotide sequences (dataset) in MATLAB?

See above

07 August 2014 2,199 2 View

How do I selectively download 3 fields from every record in UniProtKB?

See above

07 August 2014 7,140 2 View

How can I calculate the RMSE in 2D QSAR studies?

See above.

04 May 2014 1,398 2 View

How can I create a parameter file in NAMD tool?

03 April 2014 4,954 0 View

Can anyone recommend a protein ligand complex dynamics simulations in NAMD tool?

Dynamics simulations.

03 April 2014 3,114 5 View

Which tool is best for MD simulations?

see above

02 March 2014 419 8 View

What is the script of the membrane proteins simulations in NAMD?

Membrane protein simulations.

08 September 2013 5,319 3 View

Weak DAPI staining after immunohistochemistry - how to improve?

After immunohistochemistry of previously fixed in PFA and EtOH and then frozen 20 μm sections of zebrafish brain, DAPI staining is very weak (right) compared to the same sections stained without...

05 August 2024 9,637 2 View

The Curse of Evolution and Complexity?

Brain and body mass together are positively correlated with lifespan (Hofman 1993). The duration of neural development is one of the best predictors of brain size, and conception is the best...

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Radiogenomics Cancer Research Challenges?

what are the top 3 challenges to the advancement of the field of Radiogenomics in cancer research? is it the availability of easily available low-cost matched imaging and biosamples with clinical...

03 August 2024 5,828 4 View

I am working on my Master's thesis on the biogeography of the genus Ruagea and I would like to ask, could someone help me to check whether my result?

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28 July 2024 2,979 1 View

Could you try using PeptiCloud and see if it's a useful tool for biology research?

PeptiCloud (www.pepticloud.com) is a bioinformatic platform that allows researchers to organize and share their data for their projects as well as collaborate with others in one place. Through...

28 July 2024 4,762 2 View

Do you know of any online international conferences that offer free discussions?

Do you know of any online international conferences that offer free discussions? I am looking for examples in the field of molecular ecology and DIY biology.

28 July 2024 6,501 0 View

Illustra™ MicroSpin™ G-25 columns what it is used for?

Hello, We found three packages of Illustra™ MicroSpin™ G-25 columns in the cabinet of an unused lab. They are very old but have never been opened. I have never used this kit before, and I couldn't...

25 July 2024 4,927 3 View

Pink bacterial colonies?

I am cloning an overexpression plasmid with my protein of interest tagged with mScarlet. After transforming my ligated product into DH5α bacteria and plating on LB agar, I noticed colonies with a...

22 July 2024 5,953 6 View

For a case-control study for Breast Cancer incidents in a particular County in USA, what data can be used as Control? E.g. colorectal cancer?

The County health department is providing Breast cancer incident data. If colorectal cancer cases could be used as control, then we can get respective data from health department as well.

22 July 2024 9,954 4 View

How are clinical and environmental yeast/fungal strains stored usually in mycology laboratories?

I understand a glycerol stock for long-term preservation would be ideal, but how are working cultures generally stored? Mainly concerning Candida spp. isolates. A few references mention that they...

22 July 2024 6,592 3 View

Madhu Sudhana Saddala

It is very useful

Rohit Suratekar

which technique u r talking about ?

Sophia Isabel

hai plz tell me what insilico technique is that?

Molecular dynamics simulations done with NAMD only protein but what is script of Protein and ligand complex in NAMD tool?

Danish Jasnaik

Hi,

You will get the script on NAMD and VMD's site. Hope this helps.

Regards