I have sent my samples to some US company that does chip-qPCR. They have sent me the data but did not make the graphs. Can anyone help me on this? I have never worked on chip assay so I have no idea about it. This is the following detail about the experiment. I have sent 2 cell samples to see the effect of 2 proteins on my 1 qPCR target(treated vs non-treated). how to calculate fold enrichment from ct values of different values (protein IgG)

2 samples-  No treat  and Treat

2 proteins- protein a and protein b

1qpcr target

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