How can I predict microRNAs interaction with long non coding RNAs?

Mohsen Sheykhhasan @Mohsen-Sheykhhasan

04 August 2018 1 8K Report

Is there any tool/ software to draw the overlapping between microRNAs interaction with long non coding RNAs?

Is there any DATABASE for Identification of the CRC‑associated target genes for microRNA?

Giuseppe G. F. Leite

Dear Mohsen Sheykhhasan

I suggest:

NPInter v3.0 > https://www.bioinfo.org/NPInter/search.php

Best

Leite

Badges
Science topic

More Mohsen Sheykhhasan's questions See All

What is/are the best ML classifier(s) for Sentinel2 images?

Hi I am trying to segment a sentinel2 image. At this stage, I want to run a binary classifier that assigns each pixel to either farm or non-farm pixel. For this purpose, I have 4 10m bands...

15 February 2021 3,596 9 View

Does sds interfere with immunization?

I want to extract a protein from polyacrylamide gel to be used for immunization. I am wondering if I need to run PAGE since sds might interfere with the immunization process. Thank you

10 February 2021 8,568 3 View

What reference do you recommend about doublet lattice method (DLM) coupling with finite element method (FEM) ?

I want to write a code related to the flutter of aeroelastic wing under unsteady load using doublet lattice method (DLM). I want a good reference with numerical examples or a book which learn me...

25 January 2021 7,488 3 View

Recombinant restriction enzyme: how strong should the corresponding methyltransferase expression level be?

Hello. We are planning expression of a restriction enzyme in E. coli, and wondering how much of the corresponding methyltransferase is needed to be expressed in order to protect the host genome...

23 January 2021 2,096 4 View

I'm looking for different RCA's classifications in America?

Please help me find a brief history of Recycled Concrete Aggregate (RCA) CLASSIFICATION in the U.S. any paper or Official U.S. state DOTs' document. Target: To find out how many classifications of...

12 January 2021 7,564 3 View

What is the best statistical method for analysis of pooled fecal samples?

Hello We performed a study on the intestinal microbiota of rats in six intervention groups (8 rats in each group). It is suggested that since the rats in each group were the same in terms of...

10 January 2021 2,507 4 View

What are the best new released researches regarding income inequality in India ?

I need to survey the result of the inquiries regarding the origins of the reproduction of income inequality in the india for literature review of my thesis.

23 December 2020 850 3 View

How to read an HPLC report?

I have four HPLC graphs (for methyl ethyl ketone (MEK) and sulfuric acid and little organic monomers) and I want to analyze them. Is there anyone who can help me with this?

23 December 2020 6,180 3 View

Which free software you prefer to get your STL file measurements ?

here I'm asking about different variants of 3D software's used to get STL file measurements made from CBCT

20 December 2020 4,450 2 View

How to solve OdbError in Abaqus Python script?

I am running a 3D solid model in Abaqus Python script, which is supposed to be analyzed for 200 times as the model has been arranged in a for loop (for i in range(0,199):). Sometimes, I receive...

09 December 2020 7,401 3 View

MiRNA qpcr problem?

Dear All, mirna primer showing some problem in the melting curve? any idea why? As attached is the melting curve. The forward sequence is obtained from miRBase and reverse primer is universal.

28 February 2021 5,008 4 View

Can I put a figure that was drawn by Bio-Render in publication paper?

I want to publish paper in journal but I have figures which have drawn with bio-renders, can I put them in the paper or which other software I can use to draw them?

27 February 2021 8,179 1 View

Can MicroRNA cross the blood brain barrier?

In diseased conditions, many genes and gene products are visible in the bloodstream. So my question is whether we can find traces of microRNA which is involved in disease and disorder in blood serum?

24 February 2021 7,064 3 View

Are exogenous molecules transferred between human cells during doubling ?

Hello RG community, I wonderer whether exogenous molecules (e.g. reporter plasmids, miRNAs or other artificial molecules) are transferred between cultured human cells during their doubling ? So,...

21 February 2021 6,633 3 View

Has anyone encountered any problems with abm good microRNA primers for quantification of mature miRNAs?

I've been trying to quantitate mature microRNAs in 293T cells with and without 'X'. 2ug of total RNA (isolated by Trizol method) is converted to cDNA using All-in one microRNA cDNA synthesis kit...

17 February 2021 8,986 2 View

Recommendations for sample size in visual qualitative research (using children's drawings)?

Hi everyone! Asking for a little help, if I may. I am working on a research project, where I aim to analyse children's drawings about Covid-19. I am fairly new to using visual data in qualitative...

07 February 2021 9,530 3 View

What is the best way to fix plasma derived miRNA for subsequent cDNA synthesis?

I need to quantify blood plasma derived miRNA through q-RT-PCR. For this I need to fix RNA content in my cDNA reaction. What is the best way to do this? Currently, I take readings of my plasma...

03 February 2021 9,330 3 View

What is the general miRNA yield one gets from the Qiagen miRNEASY serum/plasma advanced kit?

I am using the Qiagen miRNEASY serum/plasma advanced kit, using 400ul of frozen plasma. What is the yield you get on average? I am using nanodrop currently for quantification. I am getting...

02 February 2021 8,806 2 View

Best way to draw COLONY output / pedigrees?

Hi, I am using the sibship analysis software COLONY 2.0.6.6 (most recent version) on about 150 individuals offspring, with some of them as potential fathers and mothers. COLONY provides a lot...

02 February 2021 6,910 2 View

How to plot 3D plot for Measured value of antenna?

Hello everyone, I am trying to plot a 3D pattern from measured data of antenna in the MATLAB, for this, I have many files for one GHz frequency at different theta(e.g theta 90,80,70, etc). My...

31 January 2021 8,458 2 View