Use MEGA 6.0 software to build phylogenetic tree and get some help from tutorial.

Hi Muzaffar,

Thanks! I'll give a shot.

Jing

Hi Muzaffar,

Do you know if I can specify the region of SNPs and SSRs of my sequence in Mega?

Thanks,

Jing

Hi Jing

You can align Amino Acid sequence deduced from nucleotide  basis and then using snipping tool, any area could be highlighted.

Hi Muzaffar,

Thanks a lot! But I was wondering what's the advantage of transferring nucleotide basis into amino acid sequence?

Thanks,

Jing

Hi Jing

You can analyze non-synonymous and synonymous mutations in a better way

For further query feel free to contact me 

[email protected]

Regards,

Muzaffar