I am doing flow cytometry with mouse oesophageal kerats and it works very well. To avoid aggregates and to have them as happier has possible, I use Keratinocyte-Serum Free Media (w/o CaCl2) containing: Epithelial Growth Factor 1ng/ml and Bovine Pituitary Extract 45ug/ml and 2% Fetal Bovine Serum.