I am trying to perform a metagenomics study from a tissue sample and the procedure deals with separation of the bacterial DNA from the mammalian DNA mix by sucrose gradient method. I am unable to find the literature regarding this protocol.
Dear Mitesh Shrestha
Pls. find the attached files
Hoping this will be helpful to your project, good luck
Best regards
Prof. Houda Kawas
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3816399/
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC45776/pdf/pnas01101-0119.pdf
http://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=3&cad=rja&uact=8&ved=0ahUKEwixuqKEzMvTAhVHXiwKHZiZBmgQFggzMAI&url=http%3A%2F%2Fwww.nature.com%2Fprotocolexchange%2Fprotocols%2F1185&usg=AFQjCNGeJ8NSsyRykeEbb8_4pwuWXcZXHQ
https://www.qiagen.com/us/resources/molecular-biology-methods/dna/
http://scholar.google.com/scholar_url?url=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC389671/pdf/pnas00088-0154.pdf%2520sivu%25201&hl=ar&sa=X&scisig=AAGBfm2CtrngGOppCuewfNu-8JaIS89D5g&nossl=1&oi=scholarr
..
https://www.staff.ncl.ac.uk/p.dean/quiagen_molecular_biology_bench_guide.pdf
http://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=3&cad=rja&uact=8&ved=0ahUKEwjum4OW0svTAhVMiCwKHdYbAXgQFggzMAI&url=http%3A%2F%2Fwww.nature.com%2Fprotocolexchange%2Fprotocols%2F1185&usg=AFQjCNGeJ8NSsyRykeEbb8_4pwuWXcZXHQ
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC389671/pdf/pnas00088-0154.pdf
http://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=9&cad=rja&uact=8&ved=0ahUKEwixuqKEzMvTAhVHXiwKHZiZBmgQFghnMAg&url=http%3A%2F%2Fwww.gelifesciences.co.kr%2Fwp-content%2Fuploads%2F2016%2F07%2F023.6_Cell-Separation-Media.pdf&usg=AFQjCNGp2n9GWJy5iThYzbOZ_r_8QwjL0w
http://link.springer.com/protocol/10.1385/0-89603-127-6%3A235
http://download.bioon.com.cn/view/upload/month_0902/20090219_883c8288875809d32b83WmsR56xIB531.attach.pdf
Hoping this will be helpful to your project
good luck
271
Hi Mitesh
You can read some useful references 1
2
https://www.sciencedirect.com/science/article/pii/S0944501314001153
3
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC91166/
4
https://thermofisher.co.nz/Uploads/file/Scientific/Applications/Equipment-Furniture/Practical-Techniques-for-Centrifugal-Separations.pdf
5
https://www.nature.com/nprot/journal/v2/n3/full/nprot.2007.58.html
6
7
https://link.springer.com/protocol/10.1385/0-89603-127-6%3A235/fulltext.html
8
http://www.aun.edu.eg/molecular_biology/Proceeding_Dec2011/Current%20Protocols%20in%20Mol.%20Biol..pdf
9
http://www.sigmaaldrich.com/content/dam/sigma-aldrich/articles/biofiles/biofiles-pdf/biofiles_v6_n5.pdf
10
http://www.gelifesciences.co.kr/wp-content/uploads/2016/07/023.6_Cell-Separation-Media.pdf
Thank you very much Houda Kawas sir and Laith Al-Ani sir..I am very grateful for providing me with the necessary articles..
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