I have four patterns of 2DE gels from my cell lysate and I want to compare these patterns using software. I tried before with the naked eye and but it was too difficult.
Many software available but according to me you can go with Imagemaster 2D or melanie.
PDQuest. You might find it good to use!
DECODON Delta2D is a very good soft ware for 2D gel analyses. You can download a free trial to analyze your gels.
ImageMaster Platinum 7 is a very good software from GE Healthcare and you can download a trial version for 14 days to analyse your gels.
Note: Once installed in a system, it can't be reinstalled on the same.
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