Autodock tutorial for beginners?

More Rabbee G. Mahmudunnabi's questions See All

How much microRNA concentration is being reported just after extraction from exosome?

I was extracting miRNA from lung cancer cell(A549) derived exosome by Total Exosome RNA & Protein Isolation Kit from Invitrogen™. I quantified the small RNA concentration with NanoDrop just...

07 August 2019 7,317 5 View

How to make RNase free PBS buffer?

I know that DEPC treatment can make water RNase free. If I use DEPC-treated water for making PBS, I think, at the time of checking the pH the solution may be contaminated with RNase. Is it...

06 July 2019 1,504 9 View

How do I get the information of interacting molecules or proteins with a marker protein?

Suppose within body fluid (e.g., blood) there are exosomes with specific marker protein to be detected. I want to know what type of molecule might have the possibility to interacts with the...

08 September 2018 6,015 0 View

Can you suggest some tutorials of electrochemical detecton of DNA methylation?

Can you suggest some sites where I could acquire proper understanding of electrochemistry and electrochemical detecton of DNA methylaton at a same time?

09 October 2015 6,694 0 View

Autogrid launching generating error?

Run > Run Autogrid > launch > Error reports in *python shell*

10 November 2014 5,859 3 View

Can someone help with a "Target.pdbqt" preparation problem?

During preparation of .pdbqt file I had a warning like that : Total kollman charge added = -166.952. What's that? explain please.

10 November 2014 9,590 4 View

What does viral envelope contains: lipid bilayer or phospholipid bilayer?

Enveloped viruses are formed by budding through cellular membranes, usually the plasma membrane but sometimes an internal membrane such as the ER, golgi, or nucleus. cell membrane composed of...

10 November 2014 4,618 3 View

Where can I find an automatic alignment software?

I want an alignment of approx. 100 sequence considering 100% similar sequence only once.

10 November 2014 4,164 7 View

Why can't oxaloacetate pass through inner mitochondrial membrane?

In Malate-aspartate shuttle oxaloacetate first convert to malate and then pass inner mitochondrial membrane. in matrix of mitochondria oxaloacetate regenerated from malate.

07 August 2014 6,658 7 View

What is ''stringent cell line''?

I was studying a paper titled ''Proteomic profiling of NCI-60 extracellular vesicles uncovers common protein cargo and cancer type-specific biomarkers.'' There I found the term cell line isolate...

01 January 1970 8,704 3 View

Which Scopus Journal provides the most affordable fees?

"PUBLISHING IN A SCOPUS JOURNAL" Researchers are now at a cross road. The critical need to publish in a Scopus or ISI, etc journal is ever vital. Journal Publication fees must be submitted....

10 August 2024 8,621 1 View

Seeking Advice on Viability and Execution of Undergraduate Thesis Topic?

Hello everyone, I am currently developing a thesis proposal and would appreciate your input on its viability and how to effectively carry it out. My proposed topic is: "Does the perceived threat...

10 August 2024 8,992 0 View

Who will be moral responsible for the death of thousands of people in the event of an earthquake?

Who will bear moral responsibility for the deaths of thousands of people in the event of an earthquake? Weeks and months remain before the onset of strong earthquakes that bring death to...

08 August 2024 6,134 12 View

GC-MS retention index prediticon?

Hello experts, Does anyone know any free software about retention index prediction ?

08 August 2024 7,403 2 View

Are there any instruments for studying time similar to the way it is in space?

There are a huge number of methods for studying objects in space, according to the senses (and not only). Mechanical, thermal, optical, acoustic, electrical, magnetic, based on particle beams,...

06 August 2024 7,102 0 View

Weak DAPI staining after immunohistochemistry - how to improve?

After immunohistochemistry of previously fixed in PFA and EtOH and then frozen 20 μm sections of zebrafish brain, DAPI staining is very weak (right) compared to the same sections stained without...

05 August 2024 9,637 2 View

Why did the authors extrapolate a phenotype that they experimentally proved in one bacterial strain across the whole genus of the organism?

I aim to be as skeptical as possible regarding whether a pair of orthologous genes results in the same phenotype in their different but related bacterial organisms under similar environmental...

05 August 2024 6,787 4 View

The Curse of Evolution and Complexity?

Brain and body mass together are positively correlated with lifespan (Hofman 1993). The duration of neural development is one of the best predictors of brain size, and conception is the best...

05 August 2024 6,247 3 View

In the case of a wound l recurrence after radical breast cancer and sentinel lymph node biopsy. Are the sentinel lymph node procedure recommended?

In the case of a wound l recurrence after radical breast cancer and sentinel lymph node biopsy. Are the sentinel lymph node procedure recommended? If no axillary lymph node dissection was not...

05 August 2024 8,056 1 View

Regarding a model for simulating battery charge and discharge, what do you consider to be high fidelity?

Regarding a model for simulating battery charge and discharge, what do you consider to be high fidelity? What is the acceptable percentage of error (regardless of the metric)? Could you suggest...

03 August 2024 5,358 0 View

Mohamad Akbari

Use my answer in this topic.

https://www.researchgate.net/post/How_to_do_docking_in_AutoDock_step_by_step/1

Steffen Wolf

have a look here:

http://vina.scripps.edu/tutorial.html

Rabbee G. Mahmudunnabi

Hi,

Mohamad Akbari & Dheeraj Chitara

Thanks both of You.

Zia Rehman Farooqi

Dear I made a tutorial for biggners plz find it. I hope it will help u