I am trying to monitor the methylation statuses of a certain set of genetic loci in glioblastoma cells following a treatment protocol. Can anyone please suggest some easy-to-use assay kits to analyze the methylation levels at certain genetic loci?
Are you trying to determine which CpG islands are methylated for a specific gene? If so, you can try Bisulfite Sequencing. It's a little involved, but it gives single base resolution to determine methylation status. You can also visualize using a CoBRA gel.
As you asked for a quantitative result I would suggest to consider either a methylight assay or to go for Pyroseq. The latter one has definitely advantages.